Molecular render representing MembraneMPNN

MembraneMPNN

Membrane-aware design with environment labels

MembraneMPNN designs sequences for membrane proteins with explicit environment awareness: label residues as buried in the bilayer, at the interface, or soluble — globally per chain or residue by residue — and the engine places hydrophobic and polar side chains where the membrane demands them. The right design engine for receptors, channels and transporters.

MembraneMPNN is live on FoldForge — load a structure, mark what to redesign, and press Design.

At a glance

Input
Membrane protein backbone (PDB)
Output
Designed sequences (FASTA)
Developed by
Baker Lab, UW
Published
Dauparas et al., 2023 · 2023
#sequence-design#membrane-proteins#inverse-folding