Molecular render representing RFdiffusion3

RFdiffusion3

All-atom diffusion with non-protein interaction conditioning

RFdiffusion3 extends backbone diffusion to all-atom protein design with explicit conditioning on ligands, nucleic acids, metals and modified residues. It generates binders and enzymes around non-protein partners directly at atomic detail. Reduces the need for post-hoc redocking in complex design campaigns.

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At a glance

Input
Target complex with ligands (PDB)
Output
All-atom designs (PDB)
Developed by
Baker Lab, UW
Published
Baker Lab, 2025 · 2025
#diffusion#all-atom#binder-design